our work

 

 

 

publications

2011

Global landscape of HIV-human protein complexes.
Jager S, Cimermancic P, Gulbahce N, Johnson JR, McGovern KE, Clarke SC, Shales M, Mercenne G, Pache L, Li K, Hernandez H, Jang GM, Roth SL, Akiva E, Marlett J, Stephens M, D'Orso I, Fernandes J, Fahey M, Mahon C, O'Donoghue AJ, Todorovic A, Morris JH, Maltby DA, Alber T, Cagney G, Bushman FD, Young JA, Chanda SK, Sundquist WI, Kortemme T, Hernandez RD, Craik CS, Burlingame A, Sali A, Frankel AD, Krogan NJ.
Nature. 2011 Dec 21;481(7381):365-70. doi: 10.1038/nature10719.
PMID: 22190034

Disseminated tuberculosis presenting as acute coronary syndrome.
Paul GK, Bari MS, Bari MA, Debnath RC, Majumder RK, Chanda SK, Siddique SR, Khan TA, Khan MK.
Mymensingh Med J. 2011 Oct;20(4):709-11.
PMID: 22081193

Tumor suppressor protein (p)53, is a regulator of NF-kappaB repression by the glucocorticoid receptor.
Murphy SH, Suzuki K, Downes M, Welch GL, De Jesus P, Miraglia LJ, Orth AP, Chanda SK, Evans RM, Verma IM.
Proc Natl Acad Sci U S A. 2011 Oct 11;108(41):17117-22. doi: 10.1073/pnas.1114420108. Epub 2011 Sep 26.
PMID: 21949408

GPS-Prot: a web-based visualization platform for integrating host-pathogen interaction data.
Fahey ME, Bennett MJ, Mahon C, Jäger S, Pache L, Kumar D, Shapiro A, Rao K, Chanda SK, Craik CS, Frankel AD, Krogan NJ.
BMC Bioinformatics. 2011 Jul 22;12:298. doi: 10.1186/1471-2105-12-298.
PMID: 21777475

HIV integration targeting: a pathway involving Transportin-3 and the nuclear pore protein RanBP2.
Ocwieja KE, Brady TL, Ronen K, Huegel A, Roth SL, Schaller T, James LC, Towers GJ, Young JA, Chanda SK, Konig R, Malani N, Berry CC, Bushman FD.
PLoS Pathog. 2011 Mar;7(3):e1001313. doi: 10.1371/journal.ppat.1001313. Epub 2011 Mar 10.
PMID: 21423673

Identifying HIV-1 host cell factors by genome-scale RNAi screening.
Pache L, Konig R, Chanda SK.
BMC Bioinformatics. 2011 Jul 22;12:298. doi: 10.1186/1471-2105-12-298.
PMID: 20654720